z230

Covance_UCO3001/create_kit_report.py

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+import glob
+import os
+import pandas as pd
+from openpyxl import Workbook
+from openpyxl.styles import Font, PatternFill, Border, Side, Alignment
+from openpyxl.utils import get_column_letter
+from datetime import date, datetime
+
+src_dir = os.path.dirname(os.path.abspath(__file__)) + "/"
+out_dir = "U:/Dropbox/!!!Days/Downloads Z230/"
+
+csv_files = glob.glob(src_dir + "sponsor-study-36940-kit-inventory-on-hand-expiration.csv")
+assert csv_files, "Kit inventory CSV not found!"
+csv_file = csv_files[0]
+print(f"Source: {csv_file}")
+
+timestamp = datetime.now().strftime("%Y-%m-%d_%H%M%S")
+out_filename = f"{timestamp} 77242113UCO3001 Kit Inventory CZE.xlsx"
+out_path = out_dir + out_filename
+
+df = pd.read_csv(csv_file, encoding="utf-8")
+cze = df[df["Country"] == "CZE"].copy()
+
+def parse_date(val):
+    if pd.isna(val):
+        return None
+    try:
+        return datetime.strptime(str(val).strip(), "%b %d, %Y")
+    except:
+        return None
+
+cze["Shipped Date"]    = cze["Shipped Date"].apply(parse_date)
+cze["Expiration Date"] = cze["Expiration Date"].apply(parse_date)
+cze = cze.sort_values(["Site", "Kit Type", "Expiration Date"]).reset_index(drop=True)
+
+today_dt = datetime.combine(date.today(), datetime.min.time())
+
+def bucket(exp_date):
+    if exp_date is None:
+        return None
+    delta = (exp_date - today_dt).days
+    if delta <= 30:
+        return "soon"
+    return "ok"
+
+cze["_bucket"] = cze["Expiration Date"].apply(bucket)
+
+kit_order = sorted(cze["Kit Type"].unique(), key=lambda x: (str(x).lstrip("T-").zfill(5), str(x)))
+kit_desc  = cze.drop_duplicates("Kit Type").set_index("Kit Type")["Description"].to_dict()
+sites     = sorted(cze["Site"].unique())
+
+# ── Styly ────────────────────────────────────────────────────────────────────
+thin           = Side(style="thin")
+border         = Border(left=thin, right=thin, top=thin, bottom=thin)
+header_font    = Font(name="Calibri", bold=True, size=11, color="FFFFFF")
+data_font      = Font(name="Calibri", size=11)
+sum_header_font = Font(name="Calibri", bold=True, size=11, color="000000")
+sum_total_font  = Font(name="Calibri", bold=True, size=11)
+zero_font       = Font(name="Calibri", size=11, color="BFBFBF")
+zero_red_font   = Font(name="Calibri", size=11, color="C00000")
+blue_fill       = PatternFill("solid", fgColor="4472C4")
+dark_blue_fill  = PatternFill("solid", fgColor="203764")
+orange_fill     = PatternFill("solid", fgColor="FFF2CC")
+green_fill      = PatternFill("solid", fgColor="E2EFDA")
+total_fill      = PatternFill("solid", fgColor="D9E1F2")
+exp_fill        = PatternFill("solid", fgColor="FFE7E7")
+ok_fill         = PatternFill("solid", fgColor="E2EFDA")
+
+# ── List 1: Kit Inventory CZE (surový listing) ────────────────────────────────
+wb = Workbook()
+ws = wb.active
+ws.title = "Kit Inventory CZE"
+
+listing_columns = [
+    ("Project No.",        14),
+    ("Region",             10),
+    ("Country",            10),
+    ("Site",               38),
+    ("Kit Type",           12),
+    ("Description",        22),
+    ("Accession",          18),
+    ("Shipped Date",       16),
+    ("Expiration Date",    16),
+    ("Days to Expiration", 20),
+]
+
+for col_idx, (header, width) in enumerate(listing_columns, 1):
+    cell = ws.cell(row=1, column=col_idx, value=header)
+    cell.font = header_font
+    cell.fill = blue_fill
+    cell.border = border
+    cell.alignment = Alignment(horizontal="center", vertical="center", wrap_text=True)
+    ws.column_dimensions[get_column_letter(col_idx)].width = width
+
+ws.row_dimensions[1].height = 30
+ws.freeze_panes = "A2"
+
+for row_idx, row in enumerate(cze.itertuples(index=False), 2):
+    days = row[9]
+    for col_idx, (col_name, _) in enumerate(listing_columns, 1):
+        value = row[col_idx - 1]
+        cell = ws.cell(row=row_idx, column=col_idx, value=value)
+        cell.font = data_font
+        cell.border = border
+        cell.alignment = Alignment(horizontal="center", vertical="center")
+        if col_name in ("Shipped Date", "Expiration Date") and value is not None:
+            cell.number_format = "DD-MMM-YYYY"
+        if col_name == "Days to Expiration":
+            cell.fill = exp_fill if (pd.notna(days) and days <= 60) else ok_fill
+
+ws.auto_filter.ref = f"A1:{get_column_letter(len(listing_columns))}1"
+
+# ── Pomocná funkce pro vykreslení souhrnné tabulky ────────────────────────────
+def write_summary_table(ws, current_row, title, rows_data, col_a_header):
+    """
+    rows_data: list of (col_a_val, col_b_val, n_soon, n_ok)
+    col_a_header: záhlaví prvního sloupce
+    """
+    # Title
+    for c in range(1, 5):
+        cell = ws.cell(row=current_row, column=c)
+        cell.fill = dark_blue_fill
+        cell.border = border
+    ws.cell(row=current_row, column=1, value=title).font = Font(name="Calibri", bold=True, size=12, color="FFFFFF")
+    ws.cell(row=current_row, column=1).alignment = Alignment(horizontal="left", vertical="center")
+    ws.merge_cells(start_row=current_row, start_column=1, end_row=current_row, end_column=4)
+    ws.row_dimensions[current_row].height = 22
+    current_row += 1
+
+    # Header
+    for col_idx, (h, f) in enumerate(zip(
+        [col_a_header, "Description", "Expiruje do 30 dní", "Expiruje později"],
+        [blue_fill, blue_fill, orange_fill, green_fill]
+    ), 1):
+        cell = ws.cell(row=current_row, column=col_idx, value=h)
+        cell.font = sum_header_font
+        cell.fill = f
+        cell.border = border
+        cell.alignment = Alignment(horizontal="center", vertical="center", wrap_text=True)
+    ws.row_dimensions[current_row].height = 28
+    current_row += 1
+
+    totals = [0, 0]
+    for col_a, col_b, n_soon, n_ok in rows_data:
+        totals[0] += n_soon
+        totals[1] += n_ok
+        row_vals  = [col_a, col_b, n_soon, n_ok]
+        row_fills = [None, None,
+                     orange_fill if n_soon > 0 else None,
+                     green_fill  if n_ok   > 0 else None]
+        all_zero = (n_soon == 0 and n_ok == 0)
+        for col_idx, (val, rfill) in enumerate(zip(row_vals, row_fills), 1):
+            cell = ws.cell(row=current_row, column=col_idx, value=val)
+            if col_idx >= 3 and val == 0:
+                cell.font = zero_red_font if all_zero else zero_font
+            else:
+                cell.font = data_font
+            cell.border = border
+            cell.alignment = Alignment(horizontal="center" if col_idx >= 2 else "left", vertical="center")
+            if rfill:
+                cell.fill = rfill
+        current_row += 1
+
+    # Total
+    for col_idx, val in enumerate(["CELKEM", "", totals[0], totals[1]], 1):
+        cell = ws.cell(row=current_row, column=col_idx, value=val)
+        cell.font = sum_total_font
+        cell.fill = total_fill
+        cell.border = border
+        cell.alignment = Alignment(horizontal="center" if col_idx >= 2 else "left", vertical="center")
+    current_row += 2
+    return current_row
+
+# ── List 2: Přehled po centrech ───────────────────────────────────────────────
+ctr_ws = wb.create_sheet("Přehled po centrech")
+ctr_ws.column_dimensions["A"].width = 22
+ctr_ws.column_dimensions["B"].width = 24
+ctr_ws.column_dimensions["C"].width = 22
+ctr_ws.column_dimensions["D"].width = 20
+
+current_row = 1
+for site in sites:
+    site_df = cze[cze["Site"] == site]
+    rows_data = []
+    for kit in kit_order:
+        desc = kit_desc.get(kit, "")
+        kit_site_df = site_df[site_df["Kit Type"] == kit]
+        n_soon = (kit_site_df["_bucket"] == "soon").sum()
+        n_ok   = (kit_site_df["_bucket"] == "ok").sum()
+        rows_data.append((f"{kit} — {desc}", desc, n_soon, n_ok))
+    current_row = write_summary_table(ctr_ws, current_row, site, rows_data, "Kit Type")
+
+# ── List 3: Přehled po typech kitů ───────────────────────────────────────────
+sum_ws = wb.create_sheet("Přehled po typech")
+sum_ws.column_dimensions["A"].width = 38
+sum_ws.column_dimensions["B"].width = 22
+sum_ws.column_dimensions["C"].width = 22
+sum_ws.column_dimensions["D"].width = 20
+
+current_row = 1
+for kit in kit_order:
+    desc   = kit_desc.get(kit, "")
+    kit_df = cze[cze["Kit Type"] == kit]
+    rows_data = []
+    for site in sorted(kit_df["Site"].unique()):
+        site_df = kit_df[kit_df["Site"] == site]
+        n_soon = (site_df["_bucket"] == "soon").sum()
+        n_ok   = (site_df["_bucket"] == "ok").sum()
+        rows_data.append((site, desc, n_soon, n_ok))
+    current_row = write_summary_table(sum_ws, current_row, f"Kit Type {kit} — {desc}", rows_data, "Centrum")
+
+wb.save(out_path)
+print(f"Saved: {out_path}")
+print(f"CZE rows: {len(cze)}, Kit types: {len(kit_order)}, Sites: {len(sites)}")