z230

2026-05-05 11:41:33 +02:00
parent 1f52ce4045
commit 5103cac2c9
271 changed files with 3525 additions and 0 deletions
@@ -0,0 +1,139 @@
+import mysql.connector
+import db_config
+
+conn = mysql.connector.connect(
+    host=db_config.DB_HOST, port=db_config.DB_PORT,
+    user=db_config.DB_USER, password=db_config.DB_PASSWORD,
+    database=db_config.DB_NAME
+)
+c = conn.cursor()
+
+# Přidat report_type do iwrs_import (pokud ještě neexistuje)
+try:
+    c.execute("""ALTER TABLE iwrs_import
+        ADD COLUMN report_type VARCHAR(20) NOT NULL DEFAULT 'patients'
+        AFTER source_file""")
+    print("ALTER TABLE iwrs_import OK — report_type přidán")
+except mysql.connector.errors.DatabaseError as e:
+    if "Duplicate column" in str(e):
+        print("report_type již existuje — přeskočeno")
+    else:
+        raise
+
+stmts = [
+    (
+        "iwrs_shipments",
+        """CREATE TABLE IF NOT EXISTS iwrs_shipments (
+    id                   INT AUTO_INCREMENT PRIMARY KEY,
+    import_id            INT          NOT NULL,
+    study                VARCHAR(20)  NOT NULL,
+    shipment_id          VARCHAR(20)  NOT NULL,
+    status               VARCHAR(50),
+    type                 VARCHAR(30),
+    ship_from            VARCHAR(50),
+    ship_to_site         VARCHAR(50),
+    location             VARCHAR(50),
+    request_date         DATE,
+    shipped_date         DATE,
+    received_date        DATE,
+    received_by          VARCHAR(100),
+    delivered_date_utc   DATE,
+    delivery_recipient   VARCHAR(100),
+    delivery_details     VARCHAR(200),
+    cancelled_date       DATE,
+    total_medication_ids SMALLINT,
+    tracking_no          VARCHAR(100),
+    shipping_category    VARCHAR(50),
+    expected_arrival     DATE,
+    FOREIGN KEY (import_id) REFERENCES iwrs_import(import_id),
+    INDEX idx_import (import_id),
+    INDEX idx_study_shipment (study, shipment_id)
+)"""
+    ),
+    (
+        "iwrs_shipment_items",
+        """CREATE TABLE IF NOT EXISTS iwrs_shipment_items (
+    id                       INT AUTO_INCREMENT PRIMARY KEY,
+    import_id                INT          NOT NULL,
+    study                    VARCHAR(20)  NOT NULL,
+    shipment_id              VARCHAR(20)  NOT NULL,
+    destination_location     VARCHAR(50),
+    shipment_status          VARCHAR(50),
+    shipment_type            VARCHAR(30),
+    destination_site         VARCHAR(50),
+    investigator             VARCHAR(100),
+    medication_description   VARCHAR(200),
+    medication_type          VARCHAR(50),
+    medication_id            VARCHAR(20),
+    packaged_lot_no          VARCHAR(50),
+    packaged_lot_description VARCHAR(100),
+    container_id             VARCHAR(50),
+    quantity                 SMALLINT,
+    expiration_date          DATE,
+    item_status              VARCHAR(50),
+    FOREIGN KEY (import_id) REFERENCES iwrs_import(import_id),
+    INDEX idx_import (import_id),
+    INDEX idx_med_id (medication_id)
+)"""
+    ),
+    (
+        "iwrs_inventory",
+        """CREATE TABLE IF NOT EXISTS iwrs_inventory (
+    id                       INT AUTO_INCREMENT PRIMARY KEY,
+    import_id                INT          NOT NULL,
+    study                    VARCHAR(20)  NOT NULL,
+    site                     VARCHAR(50),
+    investigator             VARCHAR(100),
+    location                 VARCHAR(50),
+    medication_id            VARCHAR(20),
+    packaged_lot_no          VARCHAR(50),
+    original_expiration_date DATE,
+    expiration_date          DATE,
+    received_date            DATE,
+    receipt_user             VARCHAR(100),
+    subject_identifier       VARCHAR(20),
+    quantity_assigned        SMALLINT,
+    irt_transaction          VARCHAR(100),
+    date_assigned            DATE,
+    assignment_user          VARCHAR(100),
+    dispensation_status      VARCHAR(50),
+    dispensing_date          DATE,
+    quantity_dispensed       SMALLINT,
+    dispensing_user          VARCHAR(100),
+    quantity_returned        SMALLINT,
+    date_returned            DATE,
+    return_user              VARCHAR(100),
+    FOREIGN KEY (import_id) REFERENCES iwrs_import(import_id),
+    INDEX idx_import (import_id),
+    INDEX idx_site (study, site)
+)"""
+    ),
+    (
+        "iwrs_destruction",
+        """CREATE TABLE IF NOT EXISTS iwrs_destruction (
+    id                       INT AUTO_INCREMENT PRIMARY KEY,
+    study                    VARCHAR(20)  NOT NULL,
+    site_id                  VARCHAR(50),
+    investigator             VARCHAR(100),
+    location                 VARCHAR(50),
+    basket_id                VARCHAR(20)  NOT NULL,
+    destruction_date         DATE,
+    medication_description   VARCHAR(200),
+    medication_id            VARCHAR(20),
+    packaged_lot_description VARCHAR(100),
+    comments                 VARCHAR(500),
+    imported_at              DATETIME NOT NULL DEFAULT CURRENT_TIMESTAMP,
+    UNIQUE KEY uq_destruction (study, basket_id, medication_id),
+    INDEX idx_study_basket (study, basket_id)
+)"""
+    ),
+]
+
+for name, sql in stmts:
+    c.execute(sql)
+    print(f"OK: {name}")
+
+conn.commit()
+c.close()
+conn.close()
+print("\nVšechny tabulky připraveny.")